EANMD
EANMD is a machine learning tool that uses XGBoost to predict alternative splicing events that trigger nonsense-mediated mRNA decay (NMD). It integrates sequence features and evolutionary conservation to classify NMD-targeted isoforms.
Key features:
- XGBoost-based classification model
- Prediction of AS-NMD events from transcript features
- Integration of evolutionary and sequence-based features
- Applied in neurodevelopmental disorder research